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Description:

 BEL (Biological Expression Language) is a language for representing scientific findings in the life sciences in a computable form. BioPAX is a data format for encoding biological pathways.

This project goal is to convert between BEL statements and BioPAX (Level 3) biological pathways. Results: A conversion tool that reads BEL input and produces BioPAX XML output.  The tool could also convert in reverse (BioPAX to BEL)Further comparison between these two formats can be found at A Comparison of BEL V1.0 and BioPAX (Level 3).

Result:

The result of this project will be a tool for conversion between BEL and BioPAX.

Prerequisites:

BioPAX

Mentor:

...

William Hayes (email: whayes@selventa.com)