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location(), loc()

location() or loc() can be used as an argument within any abundance function except compositeAbundance() to represent a distinct subset of the abundance at that location. Location subsets of abundances have the general form:

f(ns:v, loc(ns:v))

Examples

Cytoplasmic pool of AKT1 protein
p(HGNC:AKT1, loc(MESHCS:Cytoplasm))
Endoplasmic Reticulum pool of Ca2+
a(CHEBI:"calcium(2+)", loc(GOCC:"endoplasmic reticulum"))

 

 

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