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Building Custom Namespaces

v20150611

PrefixNamespace Link
AFFXAffymetrix Probe Set IdentifiersGene and Gene Productshttp://resource.belframework.org/belframework/20150611/namespace/affy-probeset-ids.belns
CHEBIChemicals of Biological Interest (Names)Chemicalhttp://resource.belframework.org/belframework/20150611/namespace/chebi.belns
CHEBIIDChemicals of Biological Interest (Identifiers)Chemicalhttp://resource.belframework.org/belframework/20150611/namespace/chebi-ids.belns
DODisease Ontology (Names)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/disease-ontology.belns
DOIDDisease Ontology (IDs)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/disease-ontology-ids.belns
EGIDEntrez Gene IdentifiersGene and Gene Productshttp://resource.belframework.org/belframework/20150611/namespace/entrez-gene-ids.belns
GOBPGO Biological Processes (Names)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/go-biological-process.belns
GOBPIDGO Biological Processes (IDs)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/go-biological-process-ids.belns
GOCCGO Cellular Component (Names)Otherhttp://resource.belframework.org/belframework/20150611/namespace/go-cellular-component.belns
GOCCIDGO Cellular Component (IDs)Otherhttp://resource.belframework.org/belframework/20150611/namespace/go-cellular-component-ids.belns
HGNCHGNC Human Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20150611/namespace/hgnc-human-genes.belns
MESHCMeSH Chemicals (Names)Chemicalhttp://resource.belframework.org/belframework/20150611/namespace/mesh-chemicals.belns
MESHCIDMeSH Chemicals (IDs)Chemicalhttp://resource.belframework.org/belframework/20150611/namespace/mesh-chemicals-ids.belns
MESHCSMeSH Cellular Structures (Names)Otherhttp://resource.belframework.org/belframework/20150611/namespace/mesh-cellular-structures.belns
MESHCSIDMeSH Cellular Structures (IDs)Otherhttp://resource.belframework.org/belframework/20150611/namespace/mesh-cellular-structures-ids.belns
MESHDMeSH Diseases (Names)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/mesh-diseases.belns
MESHDIDMeSH Diseases (IDs)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/mesh-diseases-ids.belns
MESHPPMeSH Phenomena and Processes (Names)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/mesh-processes.belns
MESHPPIDMeSH Phenomena and Processes (IDs)Biological Processhttp://resource.belframework.org/belframework/20150611/namespace/mesh-processes-ids.belns
MGIMGI Mouse Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20150611/namespace/mgi-mouse-genes.belns
RGDRGD Rat Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20150611/namespace/rgd-rat-genes.belns
SCHEMSelventa Legacy Chemical NamesChemicalhttp://resource.belframework.org/belframework/20150611/namespace/selventa-legacy-chemicals.belns
SCOMPSelventa Named ComplexesOtherhttp://resource.belframework.org/belframework/20150611/namespace/selventa-named-complexes.belns
SDISSelventa Legacy DiseasesBiological Processhttp://resource.belframework.org/belframework/20150611/namespace/selventa-legacy-diseases.belns
SFAMSelventa Protein FamiliesOtherhttp://resource.belframework.org/belframework/20131211/namespace/selventa-protein-families.belns
SPSwiss-Prot (Entry Names)

Gene and Gene Products

http://resource.belframework.org/belframework/20131211/namespace/swissprot.belns
SPIDSwiss-Prot Proteins (Accession Numbers)Gene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/swissprot-ids.belns

v20131211

PrefixNamespace Link
AFFXAffymetrix Probe Set IdentifiersGene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/affy-probeset-ids.belns
CHEBIChemicals of Biological Interest (Names)Chemicalhttp://resource.belframework.org/belframework/20131211/namespace/chebi.belns
CHEBIIDChemicals of Biological Interest (Identifiers)Chemicalhttp://resource.belframework.org/belframework/20131211/namespace/chebi-ids.belns
DODisease Ontology (Names)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/disease-ontology.belns
DOIDDisease Ontology (IDs)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/disease-ontology-ids.belns
EGIDEntrez Gene IdentifiersGene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/entrez-gene-ids.belns
GOBPGO Biological Processes (Names)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/go-biological-process.belns
GOBPIDGO Biological Processes (IDs)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/go-biological-process-ids.belns
GOCCGO Cellular Component (Names)Otherhttp://resource.belframework.org/belframework/20131211/namespace/go-cellular-component.belns
GOCCIDGO Cellular Component (IDs)Otherhttp://resource.belframework.org/belframework/20131211/namespace/go-cellular-component-ids.belns
HGNCHGNC Human Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/hgnc-human-genes.belns
MESHCSMeSH Cellular Structures (Names)Otherhttp://resource.belframework.org/belframework/20131211/namespace/mesh-cellular-structures.belns
MESHDMeSH Diseases (Names)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/mesh-diseases.belns
MESHPPMeSH Phenomena and Processes (Names)Biological Processhttp://resource.belframework.org/belframework/20131211/namespace/mesh-processes.belns
MGIMGI Mouse Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/mgi-mouse-genes.belns
RGDRGD Rat Genes (Symbols)Gene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/rgd-rat-genes.belns
SCHEMSelventa Legacy Chemical NamesChemicalhttp://resource.belframework.org/belframework/20131211/namespace/selventa-legacy-chemicals.belns
SCOMPSelventa Named ComplexesOtherhttp://resource.belframework.org/belframework/20131211/namespace/selventa-named-complexes.belns
SDISSelventa Legacy DiseasesBiological Processhttp://resource.belframework.org/belframework/20131211/namespace/selventa-legacy-diseases.belns
SFAMSelventa Protein FamiliesOtherhttp://resource.belframework.org/belframework/20131211/namespace/selventa-protein-families.belns
SPSwiss-Prot (Entry Names)

Gene and Gene Products

http://resource.belframework.org/belframework/20131211/namespace/swissprot.belns
SPACSwiss-Prot Proteins (Accession Numbers)Gene and Gene Productshttp://resource.belframework.org/belframework/20131211/namespace/swissprot-ids.belns

 

v1.0

PrefixNamespace Link
CHEBIChemicals of Biological Interest (Names)Chemicalhttp://resource.belframework.org/belframework/1.0/namespace/chebi-names.belns
CHEBIIDChemicals of Biological Interest (Identifiers)Chemicalhttp://resource.belframework.org/belframework/1.0/namespace/chebi-ids.belns
GOGO Biological Processes (Names)Biological Processhttp://resource.belframework.org/belframework/1.0/namespace/go-biological-processes-names.belns
GOACGO Biological Processes (Accession Numbers)Biological Processhttp://resource.belframework.org/belframework/1.0/namespace/go-biological-processes-accession-numbers.belns
GOCCACCGO Cellular Component (Accession Numbers)Otherhttp://resource.belframework.org/belframework/1.0/namespace/go-cellular-component-accession-numbers.belns
GOCCTERMGO Cellular Component (Names)Otherhttp://resource.belframework.org/belframework/1.0/namespace/go-cellular-component-terms.belns
MESHPMeSH Phenomena and Processes (Names)Biological Processhttp://resource.belframework.org/belframework/1.0/namespace/mesh-biological-processes.belns
MESHDMeSH Diseases (Names)Biological Processhttp://resource.belframework.org/belframework/1.0/namespace/mesh-diseases.belns
MESHCLMeSH Cellular Locations (Names)Otherhttp://resource.belframework.org/belframework/1.0/namespace/mesh-cellular-locations.belns
SPSwiss-Prot (Entry Names)

Gene and Gene Products

http://resource.belframework.org/belframework/1.0/namespace/swissprot-entry-names.belns
SPACSwiss-Prot Proteins (Accession Numbers)Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/swissprot-accession-numbers.belns
PFHSelventa Named Human Protein FamiliesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-human-protein-families.belns
PFRSelventa Named Rat Protein FamiliesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-rat-protein-families.belns
PFMSelventa Named Mouse Protein FamiliesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-mouse-protein-families.belns
RGDRGD Approved Gene SymbolsGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/rgd-approved-symbols.belns
HGU95AV2Affymetrix GeneChip Human Genome U95Av2Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-hg-u95av2.belns
RG230ABAffymetrix GeneChip Rat Expression Set 230ABGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-rae230ab-2.belns
MG4302Affymetrix GeneChip Mouse Genome 430 2.0Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-mouse430-2.belns
MGU74ABCAffymetrix GeneChip Mouse Genome U74ABCGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-mg-u74abc.belns
HGU133ABAffymetrix GeneChip Human Genome U133ABGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-hg-u133ab.belns
MG430ABAffymetrix GeneChip Mouse Expression Set 430Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-moe430ab.belns
RG2302Affymetrix GeneChip Rat Genome 230 2.0Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-rat230-2.belns
MG430A2Affymetrix GeneChip Mouse Genome 430A 2.0Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-mouse430a-2.belns
HGU133P2Affymetrix GeneChip Human Genome U133Plus2Gene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/affy-hg-u133-plus2.belns
HGNCHGNC Approved Gene SymbolsGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/hgnc-approved-symbols.belns
EGIDEntrez Gene IdentifiersGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/entrez-gene-ids-hmr.belns
MGIMGI Approved Gene SymbolsGene and Gene Productshttp://resource.belframework.org/belframework/1.0/namespace/mgi-approved-symbols.belns
NCRSelventa Named Rat ComplexesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-rat-complexes.belns
NCHSelventa Named Human ComplexesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-human-complexes.belns
NCMSelventa Named Mouse ComplexesOtherhttp://resource.belframework.org/belframework/1.0/namespace/selventa-named-mouse-complexes.belns
SCHEMSelventa Legacy Chemical NamesChemicalhttp://resource.belframework.org/belframework/1.0/namespace/selventa-legacy-chemical-names.belns
SDISSelventa Legacy DiseasesBiological Processhttp://resource.belframework.org/belframework/1.0/namespace/selventa-legacy-diseases.belns
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2 Comments

  1. Natalie, is this just posting an overview of the namespaces currently available because it wasn't on the wiki before or is this posted due to some change we should be aware of?

    1. Yes - this is just an overview of the v1.0 namespaces detailed in the Namespaces page. Watch for information about v20131211 - http://resource.belframework.org/belframework/20131211/